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BILLY BOSTICKSON's avatar

Great work and fascinating analysis!

It would be nice, as you usually do, if you cited my original discovery of the USNAMRU/Pasteur trip to that location:

https://x.com/BillyBostickson/status/1438929425047822339

finding confirmed:

https://x.com/babarlelephant/status/1439238959691878402

and the 2016 PREDICT trip

https://x.com/BillyBostickson/status/1438940242942169094

and maybe the 3 locations map created by @tlitb

https://x.com/BillyBostickson/status/1874047537403039987

Jim Haslam's avatar

Apologies and update added under DYOR. I try to avoid Twit and source the original links in these Substack posts since most sane people stay off that website.

BILLY BOSTICKSON's avatar

Thanks, you have always been good about crediting me, so no worries, and despite our different conclusions.

Pete Lincoln's avatar

Definitely suspicious. Found this report from pasteur but they did not even mention coronaviruses .

https://www.pasteur.la/project-carried-on-in-the-lab-14/assessment-of-the-potential-vector-threat-of-bat-borne-pathogens-and-the-host-associated-ectoparasites-in-the-provinces-of-vientiane-and-khammouane-of-the-lao-pdr-batmap-project-extension/

I suspect the 2021 sequences may hv been from 2017 samples. Unlike RaTG13 they actually isolated the virus (so they say)

Jim Haslam's avatar

Yes, that is the 2017 bat fly collection GPS logistics showing Institut Pastuer collected fecal samples from Chinese horseshoe bats, but they only published the bat flies.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856264/

And you don't collect bat fecal samples to test for bat flies, they (NMRC-A and DoD) were probably looking for coronaviruses (and found them). IP didn't (couldn't) publish the bat sequences until 2021 when they went back and collected the same bat fecal samples with their own money

https://www.nature.com/articles/s41586-022-04532-4

IP only isolated Banal-236 on the 2nd collection, the one we humans produce antibodies against, but Baric can isolate any virus by just downloading the Banal sequences (presumably uploaded to DoD GEIS in 2017).

https://www.health.mil/Military-Health-Topics/Health-Readiness/AFHSD/Global-Emerging-Infections-Surveillance-and-Response

BILLY BOSTICKSON's avatar

LAB ACTIVITY

Viral and bacterial work will be performed by Dr. Marc Grandadam (IPL) and Dr. Paul

Newton’s (LOMWRU) teams in Vientiane, Lao PDR. These groups have extensive

experience in the detection of viruses and bacteria from animal and arthropod material.

1. Deep-sequencing and related pathogen identification and characterization will be

conducted in partnership with Dr. Andrew Haddow (USAMRIID).

Genomic RNA and DNA will be extracted using the appropriate kit. This will be used as the

template for CDNA synthesis using random hexamers. cDNA and DNA will be screened

using well-characterized family-specific sets of primers that detect conserved genomic

regions. These will be tested for a number of virus families. These may include, but are not

exclusive to the RNA virus families: Astroviridae, Bunyaviridae, Coronaviridae, Filoviridae,

Flaviviridae, Paramyxoviridae, Reoviridae, Rhabdoviridae, and Togaviridae